Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
PAAD rs1730982 chr16:8743015 G/A 0.000148 178 15.67 15.43 4.93 KM Plot
PAAD rs1730989 chr16:8741265 A/G 0.000157 178 15.6 15.5 4.93 KM Plot
PAAD rs1730990 chr16:8741117 G/C 0.000157 178 15.6 15.5 4.93 KM Plot
PAAD rs1734513 chr21:37022105 G/A 2.29E-6 178 5.52 17.4 15.13 KM Plot
PAAD rs1734514 chr21:37022065 G/A 2.29E-6 178 5.52 17.4 15.13 KM Plot
PAAD rs1734515 chr21:37021966 A/C 2.29E-6 178 5.52 17.4 15.13 KM Plot
PAAD rs1734516 chr21:37021458 T/C 2.29E-6 178 5.52 17.4 15.13 KM Plot
PAAD rs1734518 chr21:37021049 G/A 2.29E-6 178 5.52 17.4 15.13 KM Plot
PAAD rs1734520 chr21:37020368 T/C 2.29E-6 178 5.52 17.4 15.13 KM Plot
PAAD rs1734538 chr21:37020633 G/A 2.29E-6 178 5.52 17.4 15.13 KM Plot
PAAD rs1739812 chr1:16311027 C/A 2.01E-6 176 3.43 15.13 15.57 KM Plot
PAAD rs1739814 chr1:16312732 A/C 2.03E-6 176 3.43 14 15.62 KM Plot
PAAD rs1739815 chr1:16313274 A/T 2.03E-6 176 3.43 14 15.62 KM Plot
PAAD rs1739816 chr1:16313363 T/C 2.03E-6 176 3.43 14 15.62 KM Plot
PAAD rs1739817 chr1:16315223 G/A 2.03E-6 176 3.43 14 15.62 KM Plot